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A Network-Based Approach to Cell Metabolism
From Structure to Flux Balances
Buch von Oriol Güell
Sprache: Englisch

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Beschreibung
This thesis uses a systems-level approach to study the cellular metabolism, unveiling new mechanisms and responses that were impossible to reach with traditional reductionists procedures.
The results reported here have a potential application in areas like metabolic engineering and disease treatment. They could also be used in determining the accuracy of the gene essentiality of new genome-scale reconstructions.
Different methods and techniques, within the contexts of Systems Biology and the field known as Complex Networks Analysis have been applied in this work to show different features of the robustness of metabolic networks. The specific issues addressed here range from pure topological aspects of the networks themselves to the balance of biochemical fluxes.
This thesis uses a systems-level approach to study the cellular metabolism, unveiling new mechanisms and responses that were impossible to reach with traditional reductionists procedures.
The results reported here have a potential application in areas like metabolic engineering and disease treatment. They could also be used in determining the accuracy of the gene essentiality of new genome-scale reconstructions.
Different methods and techniques, within the contexts of Systems Biology and the field known as Complex Networks Analysis have been applied in this work to show different features of the robustness of metabolic networks. The specific issues addressed here range from pure topological aspects of the networks themselves to the balance of biochemical fluxes.
Über den Autor

Oriol Güell holds a Ph.D. in Physical Chemistry from the University of Barcelona, Spain, and has broad experience in the theoretical modelling and the experimental applications of magnetic colloidal dispersions and in the computer modelling of metabolic networks. Currently, his main research focuses on obtaining and applying bio-based polymers and plasticisers and studying their associated physicochemical properties.

Zusammenfassung

Nominated as an outstanding Ph.D. thesis by the University of Barcelona, Spain

Unveils new mechanisms and responses impossible to demonstrate with by traditional reductionist procedures

Has given rise to a large number of articles in scholarly journals

Inhaltsverzeichnis

Cellular Metabolism at the Systems Level.- Methods and Data.- Structural Knockout Cascades in Metabolic Networks.- E¿ects of Reaction Knockouts on Steady States of Metabolism.- Detection of Evolution and Adaptation Fingerprints in Metabolic Networks.- Assessing FBA Optimal States in the Feasible Flux Phenotypic Space.- Conclusions.

Details
Erscheinungsjahr: 2017
Fachbereich: Biophysik
Genre: Biologie, Mathematik, Medizin, Naturwissenschaften, Technik
Rubrik: Naturwissenschaften & Technik
Medium: Buch
Reihe: Springer Theses
Inhalt: xx
151 S.
49 s/w Illustr.
151 p. 49 illus.
ISBN-13: 9783319639994
ISBN-10: 3319639994
Sprache: Englisch
Herstellernummer: 978-3-319-63999-4
Ausstattung / Beilage: HC runder Rücken kaschiert
Einband: Gebunden
Autor: Güell, Oriol
Auflage: 1st ed. 2017
Hersteller: Springer International Publishing
Springer International Publishing AG
Springer Theses
Verantwortliche Person für die EU: Springer Verlag GmbH, Tiergartenstr. 17, D-69121 Heidelberg, juergen.hartmann@springer.com
Maße: 241 x 160 x 16 mm
Von/Mit: Oriol Güell
Erscheinungsdatum: 24.08.2017
Gewicht: 0,43 kg
Artikel-ID: 109680727
Über den Autor

Oriol Güell holds a Ph.D. in Physical Chemistry from the University of Barcelona, Spain, and has broad experience in the theoretical modelling and the experimental applications of magnetic colloidal dispersions and in the computer modelling of metabolic networks. Currently, his main research focuses on obtaining and applying bio-based polymers and plasticisers and studying their associated physicochemical properties.

Zusammenfassung

Nominated as an outstanding Ph.D. thesis by the University of Barcelona, Spain

Unveils new mechanisms and responses impossible to demonstrate with by traditional reductionist procedures

Has given rise to a large number of articles in scholarly journals

Inhaltsverzeichnis

Cellular Metabolism at the Systems Level.- Methods and Data.- Structural Knockout Cascades in Metabolic Networks.- E¿ects of Reaction Knockouts on Steady States of Metabolism.- Detection of Evolution and Adaptation Fingerprints in Metabolic Networks.- Assessing FBA Optimal States in the Feasible Flux Phenotypic Space.- Conclusions.

Details
Erscheinungsjahr: 2017
Fachbereich: Biophysik
Genre: Biologie, Mathematik, Medizin, Naturwissenschaften, Technik
Rubrik: Naturwissenschaften & Technik
Medium: Buch
Reihe: Springer Theses
Inhalt: xx
151 S.
49 s/w Illustr.
151 p. 49 illus.
ISBN-13: 9783319639994
ISBN-10: 3319639994
Sprache: Englisch
Herstellernummer: 978-3-319-63999-4
Ausstattung / Beilage: HC runder Rücken kaschiert
Einband: Gebunden
Autor: Güell, Oriol
Auflage: 1st ed. 2017
Hersteller: Springer International Publishing
Springer International Publishing AG
Springer Theses
Verantwortliche Person für die EU: Springer Verlag GmbH, Tiergartenstr. 17, D-69121 Heidelberg, juergen.hartmann@springer.com
Maße: 241 x 160 x 16 mm
Von/Mit: Oriol Güell
Erscheinungsdatum: 24.08.2017
Gewicht: 0,43 kg
Artikel-ID: 109680727
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